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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11137078 chr8:6801955 A/C POLR3D chr8:22102617-22112113:+ -0.48 -6.02 4.09E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C R3HCC1 chr8:23127633-23153792:+ -0.49 -6.52 2.16E-10 Box Plot
BLCA rs11137078 chr8:6801955 A/C REEP4 chr8:21995533-21999464:- -0.45 -6.11 2.45E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C TNKS chr8:9413424-9639856:+ -0.57 -8.77 5.91E-17 Box Plot
BLCA rs11137078 chr8:6801955 A/C VPS37A chr8:17104080-17159936:+ -0.5 -6.26 1.06E-9 Box Plot
BLCA rs11137078 chr8:6801955 A/C XPO7 chr8:21777182-21864096:+ -0.58 -7.06 7.93E-12 Box Plot
BLCA rs11137078 chr8:6801955 A/C ZNF596 chr8:182137-214703:+ -0.48 -6.17 1.77E-9 Box Plot
BLCA rs111383812 chr4:13316033 T/TTGAG ITGA4 chr2:182321929-182400914:+ 0.48 6.28 9.06E-10 Box Plot
BLCA rs111404933 chr17:44821987 G/GA C17orf69 chr17:43716341-43723594:+ 0.34 5.96 5.78E-9 Box Plot
BLCA rs111404933 chr17:44821987 G/GA LOC644172 chr17:43677491-43679748:- 1.2 18.04 4.25E-53 Box Plot
BLCA rs111404933 chr17:44821987 G/GA LRRC37A4 chr17:43578685-43595516:- -0.59 -9.92 8.73E-21 Box Plot
BLCA rs111404933 chr17:44821987 G/GA MGC57346 chr17:43697712-43715327:+ 0.56 7.57 2.83E-13 Box Plot
BLCA rs111420159 chr10:6832260 CTCTT/C IQGAP2 chr5:75699074-76003957:+ 0.48 6.07 3.15E-9 Box Plot
BLCA rs1115136 chr11:41662841 G/A CT47A1 chrX:120116330-120119642:- -0.33 -6.57 1.63E-10 Box Plot
BLCA rs111537838 chr3:107443272 G/T KRTAP7-1 chr21:32201357-32202078:- 0.37 6.06 3.34E-9 Box Plot